Bra-MIR156r

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
TT      ---  A  AC            -    -     G   A   ---ACA  CT     GT
  AGAGAA   GT CA  GAATTTGACAGA AGAG AGTGA CAC CAA      CA  TGCAT  
  ||||||   || ||  |||||||||||| |||| ||||| ||| |||      ||  |||||  T
  TTTCTT   CG GT  CTTAGACTGTCT TCTC TCACT GTG GTT      GT  ACGTA  
GC      AGC  C  -C            A    G     A   C   CTCTTC  TC     GC

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Brara.B01839.1 1.0 1 NA
Brara.C01719.1 1.0 1 NA
Brara.D00262.1 1.0 1 NA
Brara.D02060.1 1.0 1 NA
Brara.D02564.1 1.0 1 NA
Brara.E00270.1 1.0 1 NA
Brara.E01026.1 1.0 1 NA
Brara.F03810.1 1.0 NA NA
Brara.G00852.1 1.0 1 NA
Brara.G00853.1 1.0 1 NA
Brara.G01764.1 1.0 1 NA
Brara.G02852.1 1.0 0 NA
Brara.H02059.1 1.0 NA NA
Brara.I01777.1 1.0 NA NA
Brara.I03020.1 1.0 1 NA
Brara.I03021.1 1.5 1 NA
Brara.A03153.1 2.0 1 NA
Brara.C01519.1 2.0 1 NA
Brara.E02615.1 2.0 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference