Bra-MIR169f

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
             CTG    CT  -          T    T      --GCTTA  TC       T    C  C     ----G   -- TTTCTAGCCAC
    GAAGAGAGT   ATAT  AG TAGCCAAGGA GACT GCCTGC       AT  ATCTCAA GATT AA CGTCT     GGT  T           
    |||||||||   ||||  || |||||||||| |||| ||||||       ||  ||||||| |||| || |||||     |||  |           A
    TTTCTCTCG   TATA  TC ATCGGTTCCT CTGA CGGACG       TA  TGGAGTT CTAA TT GTAGA     TGT  G           
CTTA         ---    AT  T          -    -      GACTATG  TT       -    A  A     AAAAT   TT ACAAAAATCTT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Brara.A03216.1 1.0 1 NA
Brara.B02046.1 1.0 NA NA
Brara.E01518.1 1.0 1 NA
Brara.F00066.1 1.0 NA NA
Brara.G03156.1 1.0 1 NA
Brara.H00096.1 1.0 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference