Bra-MIR2111c

Basic info.

• miRNA locus ID
• Bra-MIR2111c

• miRNA locus accession
• PmiREN002488

• Organism
• Brassica rapa

• Genomic location
• Bra-A05  25572061  25572194  -

• Comments
• A member of family MIR2111

• Confidence level
• 

Secondary strurture and sequence

GA      ---       CC        G           T      T   AT   ATA   AG     TA
  GTATTG   GTGAGGA  GGGTAATC GCATCCTGAGG TTAAAG TTA  TGC   GCT  GCATA  
  ||||||   |||||||  |||||||| ||||||||||| |||||| |||  |||   |||  |||||   
  CATAAC   CATTCCT  TCCATTAG CGTAGGGCTCC AATTTT AAT  GCG   TGA  TGTGT  
 G      ATT       CT        G           T      C   --   -AC   -G     AT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference