Bra-MIR319c

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   GTTGCAA      TACC   A          A      T  A  TGTT    T  ---        T  -    A AC     C     CT  C     -  --  AAA
          GATAAA    AAG GAGTTTCCTT AGTCCA TC CA    GTGA TT   GATCCAAT AG CTCC G  TCATT ACTCA  TA CGAGT CA  CT   
          ||||||    ||| |||||||||| |||||| || ||    |||| ||   |||||||| || |||| |  ||||| |||||  || ||||| ||  ||    
          TTATTT    TTC CTCAAGGGAA TCAGGT AG GT    TACT AG   CTAGGTTA TC GAGG C  AGTAA TGAGT  AT GCTCA GT  GG   
ACAACCTTAC      -TAT   C          G      T  C  ----    T  ATT        T  A    G GT     A     AC  T     A  AA  ATA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Brara.A00643.1 2.0 NA NA
Brara.A03164.1 2.0 2 NA
Brara.D01755.1 2.0 2 NA
Brara.E00429.1 2.0 2 NA
Brara.E01256.1 2.0 2 NA
Brara.F02147.1 2.0 2 NA
Brara.I01657.1 2.0 2 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference