Bra-MIR399h

Basic info.

• miRNA locus ID
• Bra-MIR399h

• miRNA locus accession
• PmiREN002543

• Organism
• Brassica rapa

• Genomic location
• Bra-A03  6999980  7000107  +

• Comments
• A member of family MIR399

• Confidence level
• 

Secondary strurture and sequence

  -      -  -T       A   A     AA             AGTA     AG G    A  TT
AT GAAAGA AG  CAGTAAA GGG AATTC  CTTTGGCAAAGGA    CAATT  T AGAC TG  
|| |||||| ||  ||||||| ||| |||||  |||||||||||||    |||||  | |||| ||   
TA TTTTCT TC  GTCATTT CCC TTGAG  GAAACCGTTTTCT    GTTGA  A TTTG AC  
  G      A  TT       -   G     AG             --GA     -- G    A  AC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference