Bra-MIR858b

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
       - T    AA   T G T    T   T  T    -T  ---    A     C   CT
    GTG G GATC  GAG G T GGGT CGA GC AGGC  TG   TCAA GTGAG AAT  
    ||| | ||||  ||| | | |||| ||| || ||||  ||   |||| ||||| |||  T
    TAC C CTAG  CTC C G TCCA GCT TG TCTG  GC   GGTT TACTC TTG  
AAGC   T T    --   - G T    -   -  -    TT  TTT    C     -   TG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Brara.C00533.1 1.5 1 NA
Brara.E01150.1 1.5 2 NA
Brara.F01146.1 1.5 1 NA
Brara.H00653.1 1.5 2 NA
Brara.J01347.1 1.5 1 NA
Brara.J02023.1 1.5 1 NA
Brara.B00461.1 2.0 NA NA
Brara.B03395.1 2.0 2 NA
Brara.C02366.1 2.0 2 NA
Brara.E00050.1 2.0 2 NA
Brara.F02938.1 2.0 2 NA
Brara.F03068.1 2.0 2 NA
Brara.I00383.1 2.0 2 NA
Brara.I04905.1 2.0 NA NA
Brara.J00431.1 2.0 2 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference