Cru-MIR156c

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
GTGTT     ATT   ---AT         -              A     GCCT   TT     GG
     GAGGG   GAT     GGTGACAGA AGAGAGTGAGCACA ATGGT    TTC  GCATA  
     |||||   |||     ||||||||| |||||||||||||| |||||    |||  |||||   
     CTCCC   CTA     CCACTGTCT TCTCTCATTCGTGT TATCG    AAG  CGTAT  
 CTCT     CAT   GTTCT         A              G     ----   CT     TT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Carub.0004s1548.1 0.5 1 NA
Carub.0001s2589.1 1.0 1 NA
Carub.0001s2590.1 1.0 NA NA
Carub.0004s2454.1 1.0 1 NA
Carub.0005s2476.1 1.0 1 NA
Carub.0008s0542.1 1.0 1 NA
Carub.0008s1066.1 1.0 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

Link

Reference