Cru-MIR173

Basic info.

• miRNA locus ID
• Cru-MIR173

• miRNA locus accession
• PmiREN002782

• Organism
• Capsella rubella

• Genomic location
• Cru-scaffold_3  8474974  8475092  +

• Comments
• A member of family MIR173

• Confidence level
• 

Secondary strurture and sequence

 TGC     -T  C     A C      T   G      A      TGT  TCAAAA   TC
    GTTGG  GA TAAGC C TTCGCT GCA AGAGAA TCACAG   GG      GCT  
    |||||  || ||||| | |||||| ||| |||||| ||||||   ||      |||   
    CAACC  CT GTTCG G AGGCGA CGT TCTCTT AGTGTC   CC      TGA  
ATTC     TC  C     A A      T   G      -      --T  TTTCTC   AA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference