Esa-MIR157c

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
TTTGG      -T    -T   T         -              T  -  A       TTC  AG
     GAGGCG  TGAT  GTG TGACAGAAG ATAGAGAGCACAGA GA TG GATGCAA   AG  
     ||||||  ||||  ||| ||||||||| |||||||||||||| || || |||||||   ||  C
     TTCCGT  ATTA  TAC ACTGTCTTC TATCTCTCGTGTTT CT AT CTACGTT   TC  
CCCAA      TT    TC   T         G              C  C  A       TCA  GA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Thhalv10003215m 1.5 1 NA
Thhalv10006058m 1.5 1 NA
Thhalv10007832m 1.5 1 NA
Thhalv10007882m 1.5 1 NA
Thhalv10009488m 1.5 1 NA
Thhalv10016816m 1.5 1 NA
Thhalv10018638m 2.0 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference