Esa-MIR166b

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
GAGCTG     -------      -C   T      T      C    G C  TT     TCATA
      AGGCA       TAAGTT  AGG GGATGA GCCTGG TCGA A CA  TCATC     
      |||||       ||||||  ||| |||||| |||||| |||| | ||  |||||      
      TTCGT       ATTCGA  TCC CTTACT CGGACT GGCT T GT  AGTAG     
           TTTGCAC      AT   -      T      A    G T  --     TACTG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Thhalv10011238m 1.0 NA NA
Thhalv10006792m 1.5 NA NA
Thhalv10012678m 1.5 NA NA
Thhalv10016241m 1.5 NA NA
Thhalv10024403m 1.5 NA NA
Thhalv10025819m 2.0 2 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference