Esa-MIR169d

Basic info.

• miRNA locus ID
• Esa-MIR169d

• miRNA locus accession
• PmiREN005628

• Organism
• Eutrema salsugineum

• Genomic location
• Esa-scaffold_6  6265076  6265266  +

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

  -CGA            -TA           T    T     CTCTT   C    C  -T        TTTAACTTT    G                ATTT
GG    AAAGAGTATGTT   GTAGCCAAGGA GACT GCCTG     TTT ACCT CA  GATTCAAT         ATGG TTTTGGATTATTATGC    
||    ||||||||||||   ||||||||||| |||| |||||     ||| |||| ||  ||||||||         |||| ||||||||||||||||    A
CC    TTTTTCGTACAG   TATCGGTTCCT CTGA CGGAC     GGA TGGG GT  CTAAGTTG         TACT AAAACTTAATGATACG    
  TACC            TTG           -    -     --TTT   T    C  TT        ---------    A                AAAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference