Esa-MIRN1029

Basic info.

• miRNA locus ID
• Esa-MIRN1029

• miRNA locus accession
• PmiREN005680

• Organism
• Eutrema salsugineum

• Genomic location
• Esa-scaffold_1  14128823  14128963  -

• Comments
• A member of family MIRN1029

• Confidence level
• 

Secondary strurture and sequence

 AG      T  -     G      C         C      AG  A  G    -A     -   CT   CCTT
   TCACCG CG GGCTC GATTCG TTGGTGCAG TCGGGA  CA TT GCTG  CACAA CCA  TGA    
   |||||| || ||||| |||||| ||||||||| ||||||  || || ||||  ||||| |||  |||     
   AGTGGT GC CTGAG CTAAGT AACTACGTC AGCCCT  GT AA TGAC  GTGTT GGT  GCT    
AAA      C  T     G      C         -      AG  -  G    GA     T   -T   CCTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference