Mac-MIR157c

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
           A   A  TC     TGCTGT         -              T  -   CT     CTC
          G GGC CG  GGTGA      TGACAGAAG ATAGAGAGCACAGA GA TGG  TGCAA   
          | ||| ||  |||||      ||||||||| |||||||||||||| || |||  |||||    
          C CCG GC  CCACT      ACTGTCTTC TATCTCTCGTGTTT CT ACC  ACGTT   
ACACACGTTC -   -  TT     ------         G              C  C   TT     TTT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr10T02970_001 1.5 1 NA
GSMUA_Achr10T23280_001 1.5 1 NA
GSMUA_Achr3T05360_001 1.5 NA NA
GSMUA_Achr3T11170_001 1.5 1 NA
GSMUA_Achr3T27750_001 1.5 1 NA
GSMUA_Achr4T01450_001 1.5 1 NA
GSMUA_Achr4T05720_001 1.5 1 NA
GSMUA_Achr4T12470_001 1.5 1 NA
GSMUA_Achr6T22280_001 1.5 1 NA
GSMUA_Achr6T36010_001 1.5 1 NA
GSMUA_Achr7T02020_001 1.5 1 NA
GSMUA_Achr8T23820_001 1.5 1 NA
GSMUA_Achr8T25550_001 1.5 1 NA
GSMUA_Achr9T14160_001 1.5 1 NA
GSMUA_Achr9T20220_001 1.5 NA NA
GSMUA_Achr9T23140_001 1.5 1 NA
GSMUA_Achr9T27660_001 1.5 1 NA
GSMUA_Achr4T03880_001 2.0 1 NA
GSMUA_Achr5T21990_001 2.0 1 NA
GSMUA_Achr5T25090_001 2.0 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference