Mac-MIR159c

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  T     -       TCTAAA                  T TAC         -A     TCTCCC   G     T    AA    TT         A   CA   AG
   AGAGA AGGGGGA      GAGCTCTCTTCAGTCCAA C   GAGGGGAAG  GAGTA      TCT CTGGT CATG  TACC  TGGGGTGCA CCC  TGC  
   ||||| |||||||      |||||||||||||||||| |   |||||||||  |||||      ||| ||||| ||||  ||||  ||||||||| |||  |||   
   TCTCT TCTCTCT      CTCGAGGGAAGTTAGGTT G   CTCTTCTTC  CTCGT      AGA GACTA GTAC  GTGG  ACCCCACGT GGG  ACG  
CTC     C       -CTCTC                  C -TA         CC     TCCAGC   G     C    GG    TC         -   --   CT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_AchrUn_randomT13940_001 NA NA 2 (1)
GSMUA_Achr10T26610_001 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference