Mac-MIR160b

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   AGCGCAGGTGAAATG   T    C       C          A    -    -     T   G
                  GGT ATGC TGGCTCC TGTATGCCAC CATA TAGA CCAAT CAT 
                  ||| |||| ||||||| |||||||||| |||| |||| ||||| ||| G
                  CCG TACG ACCGAGG ACGTGCGGTG GTGT ATCT GGTTA GTG 
CTCTCTCTCTCTCTCTCT   -    A       A          G    T    C     -   G

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr6T27810_001 NA NA 2 (1)
GSMUA_Achr4T18240_001 0.0 NA NA
GSMUA_Achr5T03960_001 0.0 NA NA
GSMUA_Achr5T14630_001 0.0 0 NA
GSMUA_Achr5T18540_001 0.0 NA NA
GSMUA_Achr8T18930_001 0.0 0 NA
GSMUA_Achr2T17330_001 0.5 0 NA
GSMUA_Achr6T18900_001 0.5 0 NA
GSMUA_Achr9T29480_001 0.5 0 NA
GSMUA_Achr10T04600_001 1.5 0 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference