Mac-MIR160c

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
    AACGCA  T  C    GT     C       C          A   -    A     A   AT
          GG GA AAGG  TGTGC TGGCTCC TGTACGCCAC CAT GTAG TCGAT TCT  
          || || ||||  ||||| ||||||| |||||||||| ||| |||| ||||| |||   
          TC CT TTCC  GCACG ACCGAGG ACGTGCGGTG GTG CATC GGTTA AGG  
TCTCTCTCTC  T  C    --     A       A          G   T    -     G   GG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr6T02120_001 NA NA 2 (1)
GSMUA_Achr4T18240_001 1.0 NA NA
GSMUA_Achr5T03960_001 1.0 NA NA
GSMUA_Achr5T14630_001 1.0 1 NA
GSMUA_Achr5T18540_001 1.0 NA NA
GSMUA_Achr8T18930_001 1.0 1 NA
GSMUA_Achr2T17330_001 1.5 1 NA
GSMUA_Achr6T18900_001 1.5 1 NA
GSMUA_Achr9T29480_001 1.5 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference