Mac-MIR160e

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
      -     TAACAT   C     C       C         C    GT  G     A   AT
   GGA AGAGG      GGA TGTGC TGGCTCC TGTATGCCA TCGT  GG CGCCA TCT  
   ||| |||||      ||| ||||| ||||||| ||||||||| ||||  || ||||| |||   
   TCT TCTCT      TCT ATACG ACCGAGG GCGTGCGGT GGCG  TC GCGGT AGA  
CTC   C     -CTCTC   -     A       A         C    --  A     C   GC

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr4T18240_001 0.0 NA NA
GSMUA_Achr5T03960_001 0.0 NA NA
GSMUA_Achr5T14630_001 0.0 0 NA
GSMUA_Achr5T18540_001 0.0 NA NA
GSMUA_Achr8T18930_001 0.0 0 NA
GSMUA_Achr2T17330_001 0.5 0 NA
GSMUA_Achr6T18900_001 0.5 0 NA
GSMUA_Achr9T29480_001 0.5 0 NA
GSMUA_Achr10T04600_001 1.5 0 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference