Mac-MIR160g

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
        -     T  AATA        C       C         C  G      TA      AAAA
     AGA AGAGG GA    GACTATGC TGGCTCC TGTATGCCA TC CGTAGT  CCAATC    
     ||| ||||| ||    |||||||| ||||||| ||||||||| || ||||||  ||||||    C
     TCT TCTCC CT    TTGGTACG ACCGAGG GCGTGCGGT AG GCGTCA  GGTTAG    
CTCTC   C     -  ---C        A       A         -  -      TC      CTAT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr4T18240_001 0.0 NA NA
GSMUA_Achr5T03960_001 0.0 NA NA
GSMUA_Achr5T14630_001 0.0 0 NA
GSMUA_Achr5T18540_001 0.0 NA NA
GSMUA_Achr8T18930_001 0.0 0 NA
GSMUA_Achr2T17330_001 0.5 0 NA
GSMUA_Achr6T18900_001 0.5 0 NA
GSMUA_Achr9T29480_001 0.5 0 NA
GSMUA_Achr10T04600_001 1.5 0 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference