Mac-MIR164j

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
AA  -     -     -   T        -A  A          --    -       G
  GG GGAGG GCGAG CCG GCTGGAGA  GC GGGCACGTGT  TCGT GCCATCG 
  || ||||| ||||| ||| ||||||||  || ||||||||||  |||| ||||||| A
  CC CCTCC CGCTC GGC CGACCTCT  CG CCCGTGCGCA  GGCG CGGTGGC 
 A  A     T     A   T        CC  -          AC    G       A

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr10T22350_001 1.0 NA NA
GSMUA_Achr5T00500_001 1.0 1 NA
GSMUA_Achr6T31350_001 1.0 0 NA
GSMUA_Achr9T10210_001 1.0 0 NA
GSMUA_Achr9T26140_001 1.0 NA NA
GSMUA_Achr3T23360_001 1.5 1 NA
GSMUA_Achr5T26640_001 1.5 1 NA
GSMUA_Achr6T28900_001 1.5 2 NA
GSMUA_AchrUn_randomT19770_001 1.5 NA NA
GSMUA_Achr11T25720_001 2.0 NA NA
GSMUA_Achr7T15220_001 2.0 NA NA
GSMUA_Achr9T27530_001 2.0 2 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference