Mac-MIR166d

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  TT      -   A    A         TT   C  C     G           CACATGCTGTCTCCTGATTC
    GGCGAG GTT GGTT AGGGGAATG  GCC GG TCGAG TCACTTAGGCA                    
    |||||| ||| |||| |||||||||  ||| || ||||| |||||||||||                    A
    CCGTTT CAA CCGA TCTCCTTAC  CGG CC GGCTC AGTGAATCGGA                    
CGTC      A   -    C         TT   A  A     A           GCCGATTCTTCCTCCAGATG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr8T02960_001 0.5 NA 0 (1)
GSMUA_Achr2T13050_001 1.0 NA NA
GSMUA_Achr4T28360_001 1.0 NA NA
GSMUA_Achr4T31660_001 1.0 NA NA
GSMUA_Achr5T02420_001 1.0 NA NA
GSMUA_Achr5T18530_001 1.0 NA NA
GSMUA_Achr7T01060_001 1.0 NA NA
GSMUA_Achr8T20090_001 1.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference