Mac-MIR166e

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
           TTTCCT   C        TT      GT    GA   T       TA      ------T   T      AT
    GGAAGCT      TTG GGGGAATG  GTCTGG  CGAG  ATC ACCAAAC  GAGAGA       AGA GGATAG  
    |||||||      ||| ||||||||  ||||||  ||||  ||| |||||||  ||||||       ||| ||||||  C
    CCTTCGA      AAC CCCCTTAC  CGGACC  GCTC  TAG TGGTTTG  TTTTCT       TCT TCTATC  
TCTG       --TACT   C        TT      AG    --   -       CA      TCCCTTT   -      GT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr8T02960_001 1.5 NA NA
GSMUA_Achr2T13050_001 2.0 NA NA
GSMUA_Achr4T28360_001 2.0 NA NA
GSMUA_Achr4T31660_001 2.0 NA NA
GSMUA_Achr5T02420_001 2.0 NA NA
GSMUA_Achr5T18530_001 2.0 NA NA
GSMUA_Achr7T01060_001 2.0 NA NA
GSMUA_Achr8T20090_001 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference