Mac-MIR166i

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   C     C    GAGGA     --T     -   GC       -CCC   ACTCATGGAAATGACTGTTCTACAATCTACATCCCCGGTGGATGCAAGATCCAATTTACTAGACAAGTAAGTTT
    TCTCT CCTC     TGGTT   CGGAC CAG  TTCATTC    CCA                                                                          
    ||||| ||||     |||||   ||||| |||  |||||||    |||                                                                          C
    AGAGA GGAG     GCTAA   GTTTG GTT  AAGTAAG    TAG                                                                          
ACTA     T    -GATG     CTT     T   --       AGTA   GTGTGACTTTCGTCTAGATTAATCTTGCGTGTTCATAGTGTTTCGTTGTGACGACTCCTGACCTGTTCATCTTT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr8T02960_001 0.5 NA NA
GSMUA_Achr2T13050_001 1.0 NA NA
GSMUA_Achr4T28360_001 1.0 NA NA
GSMUA_Achr4T31660_001 1.0 NA NA
GSMUA_Achr5T02420_001 1.0 NA NA
GSMUA_Achr5T18530_001 1.0 NA NA
GSMUA_Achr7T01060_001 1.0 NA NA
GSMUA_Achr8T20090_001 1.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference