Mac-MIR166q

Basic info.

• miRNA locus ID
• Mac-MIR166q

• miRNA locus accession
• PmiREN012060

• Organism
• Musa acuminata

• Genomic location
• Mac-chr5  11127607  11127740  -

• Comments
• A member of family MIR166

• Confidence level
• 

Secondary strurture and sequence

          TTTCCT   A        TT      C      CA    T    GTTT    TTT   GATC
    GAAGCT      TTG GGGGAATG  GTCTGG TCGAGG  TTTG AGTA    GAGA   ACA    
    ||||||      ||| ||||||||  |||||| ||||||  |||| ||||    ||||   |||    T
    CTTCGA      AAC CCCCTTAC  CGGACC GGCTCT  GAGC TTAT    CTCT   TGT    
GTAC      --CACT   C        TT      A      -A    T    -ATT    ---   ACAT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference