Mac-MIR169n

Basic info.

• miRNA locus ID
• Mac-MIR169n

• miRNA locus accession
• PmiREN012108

• Organism
• Musa acuminata

• Genomic location
• Mac-chr9  897974  898132  +

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

            T GT    -C            T    T    --AC    T T      G    -  G      T  ATGCGA
  GGGGATAAGA C  GCTT  GTTAGCCAAGGA GACT GCCT    GGCC C CGAAGA CTTC TC ATGGTT GC      
  |||||||||| |  ||||  |||||||||||| |||| ||||    |||| | |||||| |||| || |||||| ||       
  TCCCTATTCT G  TGAA  TAATCGGTTCCT CTGA CGGA    TTGG G GTTTCT GAGG AG TACCAA CG      
AC          C -G    TC            -    -    CATT    T T      G    C  -      -  AGTCTC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• >Identification and characterization of miRNA169 family members in banana (Musa acuminata L.) that respond to fusarium oxysporum f. sp. cubense infection in banana cultivars. PeerJ, 2018