Mac-MIR319a

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
               TGTACTT   A                 TTC     -   TT T    TT    C    G   AC           AA   TC     -AA  ----     GCGCAAAT     A   CAG
                      GAG GAGCTTCCTTCGGTCCA   ATGGA TGG  G GGAG  GAAT AGCT CCG  TCATTCATTCA  CAC  AGTAG   AG    GAAGT        TCTGC TGC   
                      ||| |||||||||||||||||   ||||| |||  | ||||  |||| |||| |||  |||||||||||  |||  |||||   ||    |||||        ||||| |||    
                      CTC CTCGAGGGAAGTCAGGT   TACCT ACC  C TCTC  CTTA TCGA GGC  AGTAAGTGAGT  GTG  TCATC   TC    CTTCG        AGACG ACG   
CCTGCGATATTCTCTACTCCTT   C                 TCA     G   TT -    -T    T    G   GT           AA   TA     GAG  AAGG     GAAAAGAC     -   TCT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr10T29280_001 1.5 2 NA
GSMUA_Achr1T17150_001 1.5 2 NA
GSMUA_Achr7T21560_001 1.5 2 NA
GSMUA_AchrUn_randomT15100_001 1.5 2 NA
GSMUA_Achr9T12880_001 2.0 NA NA
GSMUA_Achr9T24770_001 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference