Mac-MIR319d

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
ATCTGAAAACCGTGTTT   A                 CTC     -   TT T    TTT    CAG  G   AC           AA   C      AAAGGAAGC    A   TT    AC   ACA  GC
                 GAG GAGCTTCCTTCAGTCCA   ATGGA TGG  G AGGG   GAAT   CT CCG  TCATTCGCTCA  CAC CAGTAG         GGAC CAA  CTCT  TCC   TG  
                 ||| |||||||||||||||||   ||||| |||  | ||||   ||||   || |||  |||||||||||  ||| ||||||         |||| |||  ||||  |||   ||   
                 CTC CTCGAGGGAAGTCAGGT   TACCT ACC  C TCTC   CTTA   GA GGC  AGTAAGTGAGT  GTG GTCATC         CTTG GTT  GGGA  AGG   AC  
              TCT   C                 TCA     T   TT -    --T    TTA  G   GT           AA   T      -GTTAGAGT    G   -T    AA   AAG  GA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr10T29280_001 1.5 2 NA
GSMUA_Achr1T17150_001 1.5 2 NA
GSMUA_Achr7T21560_001 1.5 2 NA
GSMUA_AchrUn_randomT15100_001 1.5 2 NA
GSMUA_Achr9T12880_001 2.0 NA NA
GSMUA_Achr9T24770_001 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference