Mac-MIR319e

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
          CC       TGTGTCT   A                 CTC     -   CTCT    TTT    CAA  G   AC           AA   TC     AAAG
         A  TGAGAAA       GAG GAGCTTCCTTCAGTCCA   ATGGA TGG    GGGG   GAAT   CT CCG  TCATTCATTCA  CAC  AGTAG    
         |  |||||||       ||| |||||||||||||||||   ||||| |||    ||||   ||||   || |||  |||||||||||  |||  |||||    C
         T  ACTCTTT       CTC CTCGAGGGAAGTCAGGT   TACCT ACC    TCTC   CTTA   GA GGC  AGTAAGTGAGT  GTG  TCATC    
CTCGAATCT CT       -------   C                 TCA     T   ---T    TCT    TTA  G   GT           AA   TC     GAGT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr10T29280_001 1.5 2 NA
GSMUA_Achr1T17150_001 1.5 2 NA
GSMUA_Achr7T21560_001 1.5 2 NA
GSMUA_AchrUn_randomT15100_001 1.5 2 NA
GSMUA_Achr9T12880_001 2.0 NA NA
GSMUA_Achr9T24770_001 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference