Mac-MIR319g

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
                   TAGAA       A           AA  A        -G       -T  -A   G    C     G   A       C     G  TGTT     ----GTGGAGAA     GCATGGTGA
                        GAGCTCC TTCAGTCCAAT  AG GGGTTGAG  AGTGGTT  AG  GCT CCAT CCATG ATT GGCCAAG CTTGT CT    TCACA            GTCAC         
                        ||||||| |||||||||||  || ||||||||  |||||||  ||  ||| |||| ||||| ||| ||||||| ||||| ||    |||||            |||||          
                        CTCGAGG AAGTCAGGTTA  TC CCCGATTC  TCACCGG  TC  CGA GGTG GGTAC TAA CCGGTTC GAATA GG    GGTGT            TCTCC         
GCCACACGACGCACCTTACTAACC       G           -A  G        GG       CC  AA   G    T     G   -       C     G  ----     AATAGTAGAAGT     GTTGGAGGT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr10T29280_001 1.5 1 NA
GSMUA_Achr1T17150_001 1.5 1 NA
GSMUA_Achr7T21560_001 1.5 1 NA
GSMUA_AchrUn_randomT15100_001 1.5 1 NA
GSMUA_Achr9T12880_001 2.0 NA NA
GSMUA_Achr9T24770_001 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

Link

Reference