Mac-MIR393c

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  GTG         A  A        A           T    T  GTCT   GA
     GGCAGCAGA GG GAATTCCA AGGGATCGCAT GATC CT    GCT  
     ||||||||| || |||||||| ||||||||||| |||| ||    |||   
     TCGTTGTCT CC TTTAAGGT TCCTTAGCGTA CTGG GA    TGA  
GTAAG         A  C        C           -    C  GTTT   CA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr6T08000_001 1.0 NA NA
GSMUA_Achr6T16510_001 1.0 NA NA
GSMUA_Achr6T20580_001 1.0 NA NA
GSMUA_Achr9T01140_001 1.0 NA NA
GSMUA_Achr6T09760_001 1.5 NA NA
GSMUA_Achr10T10180_001 2.0 NA NA
GSMUA_Achr10T12000_001 2.0 1 NA
GSMUA_Achr1T22350_001 2.0 NA NA
GSMUA_Achr3T23850_001 2.0 NA NA
GSMUA_Achr5T26930_001 2.0 1 NA
GSMUA_AchrUn_randomT10710_001 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference