Mac-MIR394c

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
           CTT    T    -A      TT             ACC   C    -----   A  GC
    GGGGTCT   ACGG GCTT  TTGGCA  CTGTCCACCTCCA   CTT CTTT     CTC TG  
    |||||||   |||| ||||  ||||||  |||||||||||||   ||| ||||     ||| ||   
    CTTCGGA   TGCC CGAG  AACCGT  GACGGGTGGAGGT   GAA GAAA     GAG AC  
TTCT       ---    T    CC      CC             ATA   A    ACTAC   A  CA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_AchrUn_randomT00910_001 0.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference