Mac-MIR396s

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
 AGAGAGGGATGTCAAC    -A            -   ---TG    GA
                 ACCG  TGAGGAAGTCTG GGA     GAGC  
                 ||||  |||||||||||| |||     ||||   
                 TGGC  GTTCTTTCGGAC CCT     TTTG  
GTACGTGGCACCGGCGT    AA            A   TAGTG    AC

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr10T06370_001 0.0 0 NA
GSMUA_Achr1T23840_001 0.0 0 NA
GSMUA_Achr2T04650_001 0.0 0 NA
GSMUA_Achr6T01270_001 0.0 0 NA
GSMUA_AchrUn_randomT04320_001 0.0 0 NA
GSMUA_Achr1T21940_001 0.5 0 NA
GSMUA_Achr8T30640_001 0.5 0 NA
GSMUA_Achr8T12710_001 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference