Mac-MIR396t

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   TGTAAATGATC        A -              C          T GGTT  -   AT
              CTCTTTGT G TTTTCCACAGCTTT TTGAACTGCA C    GC TCT  
              |||||||| | |||||||||||||| |||||||||| |    || |||  G
              GAGAAACA C GAAGGGTGTCGAAA AACTTGGCGT G    CG AGG  
AGAGTTAAACCAGA        - T              T          C AATT  G   CA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr3T10970_001 2.0 NA 3 (1)
GSMUA_Achr10T18020_001 1.5 NA NA
GSMUA_Achr6T31010_001 1.5 0 NA
GSMUA_AchrUn_randomT16840_001 1.5 NA NA
GSMUA_Achr4T11940_001 2.0 NA NA
GSMUA_Achr4T25410_001 2.0 NA NA
GSMUA_Achr8T13690_001 2.0 NA NA
GSMUA_Achr8T19130_001 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference