Mac-MIR399a

Basic info.

• miRNA locus ID
• Mac-MIR399a

• miRNA locus accession
• PmiREN012206

• Organism
• Musa acuminata

• Genomic location
• Mac-chr2  8953502  8953651  -

• Comments
• A member of family MIR399

• Confidence level
• 

Secondary strurture and sequence

  AGTTAAGC                TTC     C         ----      GAGAGAAA     TAAGGTT         G
          GAGCCAGTTGTGGGGC   TCTCC TTGGCAGGT    GACTCA        GGAGG       GAATGCATC 
          ||||||||||||||||   ||||| |||||||||    ||||||        |||||       ||||||||| G
          TTCGGTCAGCATCCCG   AGAGG AACCGTCCA    CTGAGT        CCTCC       TTTACGTAG 
GAGATTCGAC                TTC     A         GTAA      ------AG     -------         T

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference