Mac-MIR535c

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   -  -T  TC  AT       T   A                C   - -    A      GAG
 CA GA  GC  GC  GTCGGGT GAC ACGAGAGAGAGCACGC GGT C CGCA TCATGG   
 || ||  ||  ||  ||||||| ||| |||||||||||||||| ||| | |||| ||||||    
 GT CT  CG  CG  CGGTCCA CTG TGCTCTTTCTCGTGCG CCA G GTGT GGTACC   
A  G  CC  CT  CT       -   C                A   T T    C      GGC

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr10T28970_001 2.0 2 NA

Mature miRNA conservation

?

Mature miRNA conservation

Link

Reference