Mac-MIR828

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
    A    C    T  C  G  C         A         C    C --CC    CC
     TCCT CCAT GG AA GC TCTTGCTCA GTGAGTATT CATT G    GCCT  
     |||| |||| || || || ||||||||| ||||||||| |||| |    ||||  C
     AGGA GGTG CC TT CG AGAACGGGT CACTCATAA GTAA C    CGGG  
TACGG    A    -  -  A  T         C         A    C ACTC    CC

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr4T21700_001 1.0 1 NA
GSMUA_Achr2T17960_001 2.0 1 NA
GSMUA_Achr3T07950_001 2.0 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference