Pha-MIR156d

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
        C   GTTTTCCAT  CTA         -      -       A      G   A        A  -C  -A    --A   TTGC
         GGC         GG   ACTGACAGA AGAGAG TGAGCAC CAGCGG CAG CTGCATCG TC  GC  GCGC   CCT    
         |||         ||   ||||||||| |||||| ||||||| |||||| ||| |||||||| ||  ||  ||||   |||     
         CCG         CC   TGACTGTCT TCTCTT ACTCGTG GTCGTC GTC GACGTAGT AG  TG  CGCG   GGG    
CGTCCCTCT   ---GCCTCT  ---         C      G       C      -   -        A  CA  CA    GCA   CTAA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

PhHAL.1G031800.1 1.0 NA NA
PhHAL.1G053500.1 1.0 1 NA
PhHAL.2G302100.1 1.0 NA NA
PhHAL.2G313900.1 1.0 NA NA
PhHAL.2G372100.1 1.0 1 NA
PhHAL.2G372200.1 1.0 1 NA
PhHAL.5G037100.1 1.0 NA NA
PhHAL.6G248800.1 1.0 NA NA
PhHAL.6G265100.1 1.0 NA NA
PhHAL.7G237000.1 1.0 NA NA
PhHAL.8G162200.1 1.0 NA NA
PhHAL.4G067300.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference