Pha-MIR156e

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
GGGC       C C   ----   -        -   -         A     GGGC         ---   A
    GGGCGCG G GCA    CGG TGACAGAA GAG AGTGAGCAC CGGCC    GTGACGGCA   CCG 
    ||||||| | |||    ||| |||||||| ||| ||||||||| |||||    |||||||||   ||| C
    CCCGCGC C CGT    GCC ACTGTCTT CTC TCACTCGTG GCCGG    CGTTGCCGT   GGC 
  GG       A -   ACTC   T        T   G         C     ----         GTA   G

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

PhHAL.1G031800.1 1.0 NA NA
PhHAL.1G053500.1 1.0 1 NA
PhHAL.2G302100.1 1.0 NA NA
PhHAL.2G313900.1 1.0 NA NA
PhHAL.2G372100.1 1.0 1 NA
PhHAL.2G372200.1 1.0 1 NA
PhHAL.5G037100.1 1.0 NA NA
PhHAL.6G248800.1 1.0 NA NA
PhHAL.6G265100.1 1.0 NA NA
PhHAL.7G237000.1 1.0 NA NA
PhHAL.8G162200.1 1.0 NA NA
PhHAL.4G067300.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference