Pha-MIR160a

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
        A  T     TT        C       C          A   -    CC     -  T
    GATC AA TAAGA  GTGTGTGC TGGCTCC TGTATGCCAC CAT GTAG  CAACC CG 
    |||| || |||||  |||||||| ||||||| |||||||||| ||| ||||  ||||| || G
    CTAG TT GTTTT  TACGTACG ACTGGGG ACGTGCGGTG GTG CGTC  GTTGG GC 
TCTT    C  T     --        A       A          G   T    -C     T  G

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

PhHAL.4G038200.1 0.0 NA NA
PhHAL.7G214800.1 0.0 NA NA
PhHAL.7G342900.1 0.5 NA NA
PhHAL.1G307900.1 1.0 NA NA
PhHAL.9G210900.1 1.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference