Pha-MIR160c

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  GTCGACGATCGCCTCGTGT    C       C          A   -   GC    C -  T
                     GTGC TGGCTCC TGTATGCCAC CAT GTA  CCAA C CG 
                     |||| ||||||| |||||||||| ||| |||  |||| | || G
                     TACG ACCGAGG ACGTGCGGTG GTG CGT  GGTT G GC 
CTACTAGTACCGGACAAGACG    A       A          G   T   -A    A T  G

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

PhHAL.4G038200.1 0.0 NA NA
PhHAL.7G214800.1 0.0 NA NA
PhHAL.7G342900.1 0.5 NA NA
PhHAL.1G307900.1 1.0 NA NA
PhHAL.9G210900.1 1.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference