Pha-MIR160d

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  GGTTACGATGGTTT         C    T  C         C     -   A       CTCGA
                GAGATGTGC TGGC CC TGTATGCCA TCATC TAG GCAACAA     
                ||||||||| |||| || ||||||||| ||||| ||| |||||||     C
                CTCTATACG ACCG GG ACGTGCGGT GGTAG ATC CGTTGTT     
TTGCTCGAGCCTTTAT         A    T  C         A     C   -       ATCCT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

PhHAL.4G038200.1 0.0 NA NA
PhHAL.7G214800.1 0.0 NA NA
PhHAL.7G342900.1 0.5 NA NA
PhHAL.1G307900.1 1.0 NA NA
PhHAL.9G210900.1 1.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference