Pha-MIR162

Basic info.

• miRNA locus ID
• Pha-MIR162

• miRNA locus accession
• PmiREN016198

• Organism
• Panicum hallii

• Genomic location
• Pha-Chr01  48011290  48011453  +

• Comments
• A member of family MIR162

• Confidence level
• 

Secondary strurture and sequence

  CATCTACAC     - T T     C    T            CC     T  C    G   ATTCG     - G  GTT    TG
           AGGTG G G CTGGG GCAG GGTTTATCGATC  TTCCT GC TTGT CTG     GGAGC G TG   CAAG  
           ||||| | | ||||| |||| ||||||||||||  ||||| || |||| |||     ||||| | ||   ||||  T
           TCCAC C C GACCT CGTC CCAAATAGCTGG  AAGGG CG AACA GAC     TTTCG C AC   GTTC  
CCCTGGTTCGC     T T -     A    T            CT     -  C    -   ----G     A G  GTT    TT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference