Pha-MIR164a

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  ATC             GC C        C            TGC    --   -    TCT   TCT
     AGTGAGAGAGACC  G TGGAGAAG AGGGCACGTGCA   ATAC  GCT CTCC   TCC   
     |||||||||||||  | |||||||| ||||||||||||   ||||  ||| ||||   |||   C
     TCACTCTTTCTGG  C ACCTCTTC TCTTGTGCACGT   TATG  CGA GAGG   AGG   
TCGTT             AA T        C            -TA    AT   A    -CC   TAC

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

PhHAL.3G469200.1 1.0 0 NA
PhHAL.4G048000.1 1.0 NA NA
PhHAL.1G275700.1 1.5 2 NA
PhHAL.7G169300.1 1.5 2 NA
PhHAL.6G060800.1 2.0 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

Link

Reference