Pha-MIR164b

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  CGAT         C   A       A  C             G    --        -------            T -   ATTCCGGCAGCCGCGCGCGCCGTTCGTG
      GGCGAGGTG GCG GGTGGAG AG AGGGCACGTGCAT CATT  CTTGCTTC       CCTCTCGCCGGC T GGC                            
      ||||||||| ||| ||||||| || ||||||||||||| ||||  ||||||||       |||||||||||| | |||                             
      CCGCTCCGC CGT CCACCTC TC TCTCGTGTACGTA GTAG  GGGCGAAG       TCTACCGACGGC G TCG                            
ACGCGT         A   G       C  T             -    TC        TCCTCGA            - C   GCCGGCCGGCCGCCGTCGGTAGGGGAGA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

PhHAL.3G469200.1 1.0 0 NA
PhHAL.4G048000.1 1.0 NA NA
PhHAL.1G275700.1 1.5 2 NA
PhHAL.7G169300.1 1.5 2 NA
PhHAL.6G060800.1 2.0 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference