Pha-MIR164d

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   CT             CC  T        CA           ---      AACAC  GCCGGAGCACGGCCGGACTCACACAACTGCGTG
     TGGTGAGAAGGTC  TG TGGAGAAG  GGGTACGTGCA   GCTAGC     GC                                 
     |||||||||||||  || ||||||||  |||||||||||   ||||||     ||                                  
     ACCACTCTTCCAG  AC ACCTCTTC  CTCGTGCACGT   CGATCG     TC                                 
CTACC             -T  C        CC           CCT      ----A  GTCTCGTTTTTCGAGGGAGCGGAGCTGGCTGGT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

PhHAL.3G469200.1 1.5 0 NA
PhHAL.4G048000.1 1.5 NA NA
PhHAL.1G275700.1 2.0 2 NA
PhHAL.7G169300.1 2.0 2 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference