Pha-MIR166d

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  GT  A    -                TT         A         CCACAAGC       CCCATTTTGCCTAACATGCAGT
 G  TG AGGT TTGGTTAAGGGGGTTG  GTCTGGTTC AGGTCACCA        AGGCAAA                      
 |  || |||| ||||||||||||||||  ||||||||| |||||||||        |||||||                      G
 C  AC TCTA GACCAATTTCCCTAAC  CGGACCAGG TCTAGTGGT        TATCTAC                      
A AT  G    C                TT         C         --------       CTATGTGGGTACGTACGTATAT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

PhHAL.3G471000.1 2.0 NA NA
PhHAL.5G517200.1 2.0 NA NA
PhHAL.8G036700.1 2.0 2 NA
PhHAL.9G150700.1 2.0 NA NA
PhHAL.9G210800.1 2.0 NA NA
PhHAL.9G646900.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference