Pha-MIR166e

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
    C          GCC   T T      TT         T   CA      G    CATGCA
     GGAAGCTATT   CTG G GGAATG  GTCTGGTTC AGG  TTTAGA GAGA      
     ||||||||||   ||| | ||||||  ||||||||| |||  |||||| ||||      T
     CCTTCGATAG   GAC C CCTTAC  CGGACCAGG TCC  GGGTTT TTCT      
AACGA          --A   T C      TT         C   -C      G    ACTCCG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

PhHAL.3G471000.1 1.0 NA NA
PhHAL.5G517200.1 1.0 NA NA
PhHAL.9G150700.1 1.0 NA NA
PhHAL.9G210800.1 1.0 NA NA
PhHAL.9G646900.1 1.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

Link

Reference