Pha-MIR166g

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
               TGCT      T      TT         A         CTGT  -        -    T  CCT
      GAAGCTATT    TCTGAG GGAATG  GTCTGGTTC AGGTCTTGC    GG TTTGAGGA TGAA CT   
      |||||||||    |||||| ||||||  ||||||||| |||||||||    || |||||||| |||| ||    
      CTTCGATAG    AGACTC CCTTAC  CGGACCAGG TCTAGGGCG    TC GAGCTCCT GCTT GG   
AGAAAA         ----      C      TT         C         ----  T        T    T  ATG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

PhHAL.3G471000.1 1.0 NA NA
PhHAL.5G517200.1 1.0 NA NA
PhHAL.9G150700.1 1.0 NA NA
PhHAL.9G210800.1 1.0 NA NA
PhHAL.9G646900.1 1.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference