Pha-MIR166h

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
    GCGC       CT    A         C   C         A   T  CG  GG  AGC
        TTCATGG  GTCG GGGGAATGA GTC GGTCCGAAG CGC TG  GC  CG   
        |||||||  |||| ||||||||| ||| ||||||||| ||| ||  ||  ||    
        AGGTACT  CAGT CCCCTTACT CGG CCAGGCTTC GCG AC  CG  GC   
CGACGGTA       --    A         T   A         G   T  CA  GA  GGC

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

PhHAL.3G471000.1 1.0 NA NA
PhHAL.5G517200.1 1.0 NA NA
PhHAL.9G150700.1 1.0 NA NA
PhHAL.9G210800.1 1.0 NA NA
PhHAL.9G646900.1 1.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference