Pha-MIR166i

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  TCGCGATCGTCTT    A        TC      CG        G  -  A A    G    GT
               GTTG GGGGAATG  GTCTGG  CGAGACCG CC AG C ACGG CGGC  
               |||| ||||||||  ||||||  |||||||| || || | |||| ||||   
               CAAC CCCCTTAC  CGGACC  GCTCTGGC GG TC G TGCC GTCG  
CGCTGCTTACCTCGG    C        TT      AG        A  C  C C    -    GG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

PhHAL.3G471000.1 1.0 NA NA
PhHAL.5G517200.1 1.0 NA NA
PhHAL.9G150700.1 1.0 NA NA
PhHAL.9G210800.1 1.0 NA NA
PhHAL.9G646900.1 1.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference