Pha-MIR167a

Basic info.

• miRNA locus ID
• Pha-MIR167a

• miRNA locus accession
• PmiREN016212

• Organism
• Panicum hallii

• Genomic location
• Pha-Chr04  3494303  3494428  -

• Comments
• A member of family MIR167

• Confidence level
• 

Secondary strurture and sequence

  C         -                  C             --T  TCAAACG  -   -  CT
 A TTTGCTGGT GTGAGAGGGTGAAGCTGC AGCATGATCTGGC   GC       CC GGC CT  
 | ||||||||| |||||||||||||||||| |||||||||||||   ||       || ||| ||   
 T AAACGACCA CGCTCTCCCACTTCGATG TTGTACTAGACCG   CG       GG CCG GA  
G T         A                  -             CTT  ---CAGA  T   T  AG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference